How does increasing or decreasing the word length parameter affect the run time and results for BLAST?
BLAST is Basic Local Alignment Search Tool . It is both an algorithm and programme which is used to compare primary sequence of proteins, DNA etc.
BLAST searches for perfect sequence match length of given word size.
Increasing the word length will result in lesser hits as it is necessary to have long continuous sequences of exact match.
Decresing the word length will result in more reliable homologous sequences (hits) .
How does increasing or decreasing the word length parameter affect the run time and results for...
How does increasing the capacitance affect the charge on the capacitor with a constant voltage? How does increasing the capacitance affect the voltage across the capacitor with a constant charge? How does a larger capacitance affect the glowing light bulb (in terms of its brightness and rate of dimming)
how do i know when an account is decreasing or increasing ? how does knowing that help me when journalizing transactions?
Graphically illustrate how does this change affect the interest rate in the short run?
In PCR, how does length/composition of primers affect annealing?
separately excited series, shunt, compound DC motor: *Describe how does decreasing the field current IF affect the speed versus voltage characteristic and constant K1 of a separately-excited dc motor. K1=(n2-n1)/(E2-E1) *Describe how does decreasing the field current IF affect the torque versus current characteristic and constant K2 of a separately-excited dc motor? k2=(T2-T1)/(I1-I2) *Briefly describe how the speed varies as the mechanical load applied to the series motor increases, i.e. as the motor torque increases.
8. Know how increasing the initiator concentration does affect the rate of polymers formed by cationic polymerization.
QUESTION 16 How does an increase in the price of laptop memory chips affect the market of laptops? a. The supply curve for laptops shifts to the right b. The demand curve for laptops shifts to the right c. The demand curve for laptops shifts to the left d. The supply curve for laptops shifts to the left QUESTION 17 If long run average costs are constant with respect to output, you have a. Increasing returns to scale b. Decreasing...
30. How does an increase in stock volatility affect interest rates? A. Stock volatility has nothing to do with interest rates. B. Bonds are relatively more risky compared to sto elatively more risky compared to stocks, decreasing bond demand thereby increasing interest rates. C. Bonds are relatively less risky compared to stocks, increasing bond demand decreasing interest rates.
For each parameter listed, determine whether or not a change in the parameter will have an effect on the retention time of the compound. a.) Increasing the temperature of the injector the retention time as long as the sample vaporizes. b.) Increasing the temperature of the detector the retention time as long as the sample does not condense. c.) Increasing the amount of the injected sample the retention time as long as the column is not flooded. d.) Increasing the...
How does increasing the number of STR loci affect the DPP (DNA profiling probability) and PI (probability of identity)? Do these parameters need to be high or low in order to increase the probability of solving a crime case?