If there is a SNP in the read with respect to the reference genome, how would a spaced seed index allows for reads to map? would this map correctly even there is a SNP in the read?
If there is a SNP in the read with respect to the reference genome, how would a...
The unit of length in this question is Kmer. In search size of 16mer, with two spaced 4mer seeds in each genomic location. For example. each 16 nucleotide window in the genome is represented. As described above, how many entries in a spaced seed index? Explanation would be greatly appreciated. Assignment website said 2 is not the answer.
Question 4 Part A [10 marks] A human genome has been re-sequenced using a sequencing technology that produces 100 bp reads of high quality data. The DNA was sheared to make a paired-end library with a size range of 1500 bp +- 500 bp and sequenced to generate paired-end reads. The analysis pipeline takes short-read sequence data and aligns it to a repeat-masked version of the reference human genome sequence assembly using BLASTN. This table summarizes the results from three...
How would you map FCF with respect to NOPAT, net fixed asset investment, and net working capital?
you isolate a virus and discover that it contains a single-stranded (ss) RNA genome. How would you determine if the virus has a + sense of a - sense ssRNA genome?
3. How would you do the reference check and create reference checklist/questions that you would use to conduct employment reference checks on the successful applicant
How would you explain the presence of bacterial genes being present on the genome of their eukaryotic host, as observed in mealybugs? horizontal gene transfer random frameshift mutation intragenomic recombination recent common ancestry
The human genome contains about 3x10^9 bp of DNA. How many 200-kb fragments would you have to clone into a BAC library to have a 90% probability of in- cluding a particular sequence?
How would your initial answer for Sau3A change if you knew that the average GC content of the human genome was 35%? Express your answer using three significant figures. fragments Submit Previous Answers Request Answer X Incorrect: Try Again; 4 attempts remaining Part F How would your initial answer for BamHI change if you knew that the average GC content of the human genome was 35%? Express your answer using three significant figures. fragments How would your initial answer for...
how would you explain the presence of bacterial genes being present on the genome of Question 23 2.5 pts In 2015 Bibiana Montoya and Roxana Torres published a paper in Behavioral Ecology showing that brown booby birds, a tropical long-lived seabird, have gulars (throats) that vary in the intensity of green. They showed that male brown boobies with more intense green gulars produced healthier offspring and provided more parental care. Which TWO types of intersexual selection are brown booby birds...
How would I write code in Java, where the user inputs a binary number and the system reads the input and outputs if there was an even or odd number of 1s typed. For example, if I typed 10101 it should output as odd. and if I typed 11011 it should output as even.