gatggggatac--tgtttggagcccaag gattggtacaccatattt---tactaag
What is the score of the alignment using affine gap penalties with the following scoring parameters?
gatggggatac--tgtttggagcccaag gattggtacaccatattt---tactaag What is the score of the alignment using affine gap penalties with the following...
Write the alignment matrix and the resulting best alignment of the following two sequences using the scoring scheme: match = 2; mismatch = -1, gap penalty = -4 – gap length. The alignment matrix should have scores and trace-back arrows for every matrix element. Sequence1: TTCTCGAGACTCA Sequence2: TCTCGGACTCA
Use a dynamic programming table to align TTGGATA and TGGATCATA using the local alignment method (Smith and Waterman) with the following scoring scheme: gap: -5; mismatch: -3; match: +3.
jnment Score: Resources Give Up? Hint Check Answer estion of 10 > Consider the two sequence alignments. Alignment 1. A-SNLFDIRLIG GSNDFYEVKIMD Alignment 2 ASNLFDIRLI-G GSNDFYEVKIMD Calculate the alignment scores of each sequence alignment using identity-based scoring and the Blosum 62 substitution matrix. The identity-based scores should incorporate a gap penalty. In this case, the Blum-62 substitution matrit does not impose a gap penalty Blosum-62 Substitution Matrix Ala Arg Asn Asp Cys Gin Glu Gly His Ile Leu Lys Met Phe...
Within DrJava, create a class called StudentQuizScores and do the following using a do-while loop. 1. You program will read in a student’s first name. The same will be done for the student’s last name. Your program will use respective methods (described below) to accomplish this. 2. Your program will then read in three quiz scores, respectively. This should be done by using the same method three times. This method is described below. 3. Your program will then calculate the...
A particular talent competition has five judges, each of whom awards a score between 0 and 10 to each performer. Fractional scores, such as 8.3, are allowed. A performer’s final score is determined by dropping the highest and the lowest score received then averaging the three remaining scores. Write a program that does the following: 1. Reads names and scores from an input file into a dynamically allocated array of structures. The first number in the input file represents the...
IN C++ ADD COMMENTS AS MUCH AS POSSIBLE Exercise 1: Duplicate the Arrays Suppose you are developing a program that works with arrays of integers, and you find that you frequently need to duplicate the arrays. Rather than rewriting the array-duplicating code each time you need it, you decide to write a function that accepts an array and its size as arguments. Creates a new array that is a copy of the argument array, and returns a pointer to the...
1. Calculate a regression equation using Anxiety as the predictor and Test Score as the predicted variable. What is the slope? 2. Which is an interpretation of the slope? 3. Using the same regression, what is the y-intercept? 4. Which is an interpretation of the y-intercept? 5. Use the regression equation to predict a Test Score for someone with an Anxiety level of 6. StudyTime Anxiety Die Roll Test Score Commute Class ID# 10 Senior Freshman Junior Senior Freshman Junior...
For a certain law school, the entering students have an average LSAT score of about 700 with a standard deviation of about 40. The smoothed density histogram of the LSAT scores appears to follow a normal distribution. Sketch a smoothed density histogram (a bell-shaped curve) of the distributions for the LSAT scores. (For this problem, draw this on your own paper. You will not need to submit this graph.) Because this distribution is approximately normal, the mean is equal to...
Consider the following program that reads students’ test scores into an array and prints the contents of the array. You will add more functions to the program. The instructions are given below. For each of the following exercises, write a function and make the appropriate function call in main.Comments are to be added in the program. 1. Write a void function to find the average test score for each student and store in an array studentAvgs. void AverageScores( const int scores[][MAX_TESTS], int...
1. Calculate a regression equation using Anxiety as the predictor and Test Score as the predicted variable. What is the slope? 2. Which is an interpretation of the slope? 3. Using the same regression, what is the y-intercept? 4. Which is an interpretation of the y-intercept? 5. Use the regression equation to predict a Test Score for someone with an Anxiety level of 6. StudyTime Anxiety Die Roll Test Score Commute Class ID# 10 Senior Freshman Junior Senior Freshman Junior...