Question

jnment Score: Resources Give Up? Hint Check Answer estion of 10 > Consider the two sequence alignments. Alignment 1. A-SNLFDIRLIG GSNDFYEVKIMD Alignment 2 ASNLFDIRLI-G GSNDFYEVKIMD Calculate the alignment scores of each sequence alignment using identity-based scoring and the Blosum 62 substitution matrix. The identity-based scores should incorporate a gap penalty. In this case, the Blum-62 substitution matrit does not impose a gap penalty Blosum-62 Substitution Matrix Ala Arg Asn Asp Cys Gin Glu Gly His Ile Leu Lys Met Phe Pro Ser Thr Trp Tyr Val Ala 4 Arg -1 5 Asn-20 Asp -2 -2 Cys0 Gin -1 Glu -1 Gly 0 His -2 Ile -1 Leu -1 0 -2 0 -3 -2 -33 00-3 0 2 0 -1 1 -1 -3 -3 -1 -3 -4 -1 -2 mo.pdf - my-resume 3 pdf my-resume-3.pdf

Answer 1

Answer:

Identity scoring Indentity = 10 Aligment I gap =- 25 ASN LEDIRLIG G S NDEVEVKIM P Identity scoring & 0-25 - 25 Blossum 62 scoring = Oul+l+0+0+34 213312714 Et Aligment at ASN LE DIRLIG - GS ND FYEVKIM D. Identity scoring E4610) -25 = 40-252 15 Blossum 62 scoring + 2 + 4 +6+ 4 +6+ (-34 (-2) +(-3) + (-3+ + 2 +416-3

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