Chymotrypsin is an digestive enzyme which functions to degrade and digest the proteins. It basically plays a critical role in proteolysis. This enzyme is located in the pancreas. The enzyme comprises of a catalytic triad which consist of three amino acids which work in conjunction with each other. The three amino acids present in the catalytic triad are Serine 195, Histidine 57 and Aspartate 102. Chymotrypsin is a serine protease by nature and it undergoes a nucleophilic reaction to cause proteolysis. But the Serine 195 contains a alcohol group as a side chain and alcohol group does not function as a good nucleophile. Due to this characteristic it is crucial for converting the alcohol group to some other group which works as a good nucleophile. Therefore, the target is to convert alcohol group to alkoxide group. The Aspartate 102 and the Histidine 57 have a low barrier hydrogen bond within themselves. This makes the Histide side chain change its orientation which allows the Serine to function in the desired way. Therefore the low barrier hydrogen bond formed between the buried Asp 102 and His 57 residues of the catalytic triad work to change the alcohol group of Ser 195 to alkoxide group which favours the protein degradation process.
The low barrier hydrogen bond formed between the buried Asp 102 and His 57 residues of...
1. ASP has an important role in hydrogen bonding with the His residue in the catalytic triad of chymotrypsin. ASP and GLU have very similar properties as amino acids. Yet, mutation of ASP to GLU in the traid results in a 10^5 fold decrease in enzyme activity. Why do you think this could be the case?
How do amino acid residues Asp102, His 57, and Ser 195 participate in peptide bond hydrolysis as catalyzed by chymotrypsin?
22. Label three amino acids- Asp, His and Ser and substrate peptide bond in the following Chymotrypsin-catalyzed reaction mechanism and briefly describe their roles. Oxyanion hole Han Tetrahedral intermediate Acyl-enzyme Acyl-enzyme Oxyanion hole H- Tetrahedral intermediate Acyl-enzyme
When homoglobin shift from T state to R state, Why the bond between His HC3 and Asp FG1 is broken and His HC3 rotate toward the center of the molecule? What factors break the bond between His and Asp? By the way , for His HC3, what does the HC3 mean? thanks a lot
Draw an example of a hydrogen bond formed between a water molecule and a carboxylic acid. On your diagram, label the hydrogen bond donor and the hydrogen bond acceptor.
Cyw Ala Ατα Ile Ausn Lou Asp aly Lys Ser Which molecule below is asubunit of peptide chains a. Acetic acid b. Alanine O. ATP d. Gracil Report the charge on most aqueous aspartie acid molecules at pH-7. Report the approximate p values for the amino acid whose titration curve is shown below (note there may be more slots for answer than answers). A) Value 1 B) Value 2 c) Value 3 c) Value 4 The structure of a rare...