Question

Go to NCBI BLAST search web page 1st search: GEKDLRRAKDINQEVYNF 2nd search: PTSQRLQLLEPFDK 3rd search: GEKDLRRAKDINQEVYNF...

Go to NCBI BLAST search web page

1st search: GEKDLRRAKDINQEVYNF

2nd search: PTSQRLQLLEPFDK

3rd search: GEKDLRRAKDINQEVYNF PTSQRLQLLEPFDK

4th search: PTSQRLQLLEPFDK GEKDLRRAKDINQEVYNF

5th search: FNYVEQNIDKARRLDKEG

Identify the unknown protein using these 5 searches

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Answer #1

The below protein sequences are done through protein- protein BLAST in the  NCBI BLAST search web page

1st search: GEKDLRRAKDINQEVYNF

2nd search: PTSQRLQLLEPFDK

3rd search: GEKDLRRAKDINQEVYNF PTSQRLQLLEPFDK

4th search: PTSQRLQLLEPFDK GEKDLRRAKDINQEVYNF

5th search: FNYVEQNIDKARRLDKEG

The 5th search from the web page does not contain any putative conservative domians related to this sequences. Hence it is concluded that the protein  sequence 5th search  FNYVEQNIDKARRLDKEG is unknown protein.

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