The kinetics of double-strand formation for a DNA oligo nucleotide containing a G-T base pair was measured by temperature-jump kinetics. The reaction is
The following data were obtained:
Temperature (°C) | k1(105M-1 s-1) | k-1(s1) |
31.8 | 0.8 | 1.00 |
36.8 | 2.3 | 3.20 |
41.8 | 3.5 | 15.4 |
46.7 | 6.0 | 87.0 |
a. Determine Ea, ∆H‡ and ∆S‡ for the forward and reverse reactions; assume that the values are independent of temperature.
b. Determine the standard enthalpy ∆H° and standard entropy ∆5° changes for the reaction (assumed inde pendent of temperature) and calculate the equilibrium constant for duplex formation at 37 °C.
c. Discuss qualitatively what you would expect to happen to ∆H‡ and the standard enthalpy change for the reaction if the duplex contained one more Watson-Crick base pair. Would each increase, decrease, or remain the same?
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