Problem

The kinetics of double-strand formation for a DNA oligo nucleotide containing a G-T base p...

The kinetics of double-strand formation for a DNA oligo nucleotide containing a G-T base pair was measured by temperature-jump kinetics. The reaction is

The following data were obtained:

Temperature (°C)

k1(105M-1 s-1)

k-1(s1)

31.8

0.8

1.00

36.8

2.3

3.20

41.8

3.5

15.4

46.7

6.0

87.0

a. Determine Ea, ∆H and ∆S for the forward and reverse reactions; assume that the values are independent of temperature.


b. Determine the standard enthalpy ∆ and standard entropy ∆5° changes for the reaction (assumed inde pendent of temperature) and calculate the equilibrium constant for duplex formation at 37 °C.


c. Discuss qualitatively what you would expect to happen to ∆H and the standard enthalpy change for the reaction if the duplex contained one more Watson-Crick base pair. Would each increase, decrease, or remain the same?

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Solutions For Problems in Chapter 9