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>XP_001758837.1 MASSSRALYLFIFSLALCHSVNAGMSNVEKIQLAFKQITTASDNLRKETQLINIINAPLQGSKIAEGFAK IISAIAEYTIKINEGGVKNDNSPLPDADAKLVVQSLTTFVQVHQALLNVVIGKHGLLTLIPFFEPIRLSL VSLEATIDAFAFALIAEIPTQKPAADVQFGSLSVTLQVAITTYSSPLAKLGETMKEIAISA 1. Please use this sequence as

>XP_001758837.1

MASSSRALYLFIFSLALCHSVNAGMSNVEKIQLAFKQITTASDNLRKETQLINIINAPLQGSKIAEGFAK IISAIAEYTIKINEGGVKNDNSPLPDADAKLVVQSLTTFVQVHQALLNVVIGKHGLLTLIPFFEPIRLSL VSLEATIDAFAFALIAEIPTQKPAADVQFGSLSVTLQVAITTYSSPLAKLGETMKEIAISA

1. Please use this sequence as query and perform a regular BLAST search of NCBI protein sequences.

Which BLAST program do you need to use?

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Answer #1

protein protein BLAST (blastp) can be used for this given sequence for BLAST with NCBI protein.blasp is used for align query protein data with protein data of NCBI.

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>XP_001758837.1 MASSSRALYLFIFSLALCHSVNAGMSNVEKIQLAFKQITTASDNLRKETQLINIINAPLQGSKIAEGFAK IISAIAEYTIKINEGGVKNDNSPLPDADAKLVVQSLTTFVQVHQALLNVVIGKHGLLTLIPFFEPIRLSL VSLEATIDAFAFALIAEIPTQKPAADVQFGSLSVTLQVAITTYSSPLAKLGETMKEIAISA 1. Please use this sequence as
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