Question

9.) How many times does the motif 5’-ATG-3’ appear in the whole sequence? How many times...

9.) How many times does the motif 5’-ATG-3’ appear in the whole sequence? How many times does it function as a start codon? Name two places that this motif may be present in the whole sequence, but NOT function as a start codon.

No need for the long explanation, just the answer will do

ACGCATACTCTACCGATAGATCAGAGGAGGCCTAAGTCTCTGCGGAAGTCGATTCCAGGGGATGACCTTACTATGGTCGGGAGGTTCTCTACGCGTCCCCGCCAGACAGCTAGATTTTGTTTTCTAAAGGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTTTATTTTACTCAATATTCGACAACGTGTTGACGTTGGAAGTGACCGAAATTAGAGCGTATGTAAGACGGGATACAAACAGGACGGTACCTCTTGTCACGATAGTGATTCAAGAGGTTCCAGGGGATGACCTTACTATGGTCGGGAGGTCACGTCGCCGTTCAGAACACGCATCAGCAGCATACAAGTCTAGCAGCCGTGATGTCTGTGTCCCTGAACCTCCCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTCAACGATAGCCACACAGCCATTCCTTTTGCCTCCAAAATAGGCTCTTGATTTGGAAGTTTAAAGATGAACTGTTCAAAGTAAATGCGCGTCATAGATGTCCCCCATATCCTCGTTTTCACCACAAACTTGCATCCACTACGTAAAGGTGCAAGAAACTTTGTTGTCAATTCAGAAACTGCCAATGCTTCACCAGAACGGGACACTTCATCACAGTTGCGATAGTCGGTTCAAGAGGTTCCAGGGGATGACCTTACTATGGTCGGGAGGTCACGTCGCCGTTCAGAACACGCATCAGCAGCACAACAGTAGAGGCCTTCAACGATTTACCTTTAGTCTCCATAAACTCGTGTTGACCGTGTTGGCAGTAGTTTGCATAAACAGCGTTGTTCACAACACCAAATTGGTCTAATTCATAATCACGAACTTTAAGTTCAATCTCATGGACTCCATTCATTCCTTTGCCTCCTTGCTGTTTGAAACATGAGAGAGGTTTGAAGGTCTCGATTACAAGTCTAGCAGCCGTGATGTCTGTGTCCCTGAACCTCCCCAAAGCGGGAGTTGCGATTTGTGCTCCGGAGAGGTAGGATAAGCGGTCGACTCGAAAAACAGGGAAACACCACGTGCATAGCCGGAGCCACTGTGCCGGTAGCTTTAAGCATTGCCCGCGGTATTTATAGGTTCTATTGTGATATACGGTGTAATACTTACGCGCGCGAGCGTAGTCATAGCGTACCGGCATCTCAGAGTAGTGACAAGGTTGACCAGCCAGCACTCTACGCAGAGGGCAATATATCGGAGCTCATGCCTATAAAGCTGGCGTAAATGGTTGCTTTTTTATCAGCTTGGCCTTGGGAAAACTTTGGCAATCTCAAGTATCTTCTCTACGCTCCATTAGCTGCACAAGTAGTGTACTCGTGGGTCTATGAAGAAGATATCTCAAAGGTTCTTTGGTGTATTCATATTCTCATAATCTGCGGTCTCAAAGCACATCGGTGAGCCCTCTCAGAACAGCATCGTTGTTCATGAACTATGGAGCGTTTTCAACAACATGCTTTTCGTGACTCGTACTCTAAGGATTAACCCTAAAGGGATGCACTTTAAACAGATATCGTCAGAACAGCGCGCCTCTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCAGCCCATCAATAGAGCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTCAACCTCCGCTCGGCTCGGGTACCTCGGTTATCGTGATCACGAATGGCACTGGGACAATTACATAATCCTACAAGCAATAATAGTGAGCCTGATCTGTTACATGTCACCACCATTGATGATGATGATAAACAGTCTTCCTCTGTGGAACACGAAAGGACTCTACGCATTAATTGTGCTACATGTGACTTTCTCAGAGCCTGGATACTACTTTCTGCACAGATCTTTCCACTGTAACAACTACTTCTTCACACATTACTAGGTCAGAATAAATTTACTTGTTGATTTCGAGCTCGATTAGAATAGGCCCCCTGTAGGTATGATTGTAGCGAGATGGGAGGTTCCGCGCCAGCTAAGAGATTGGTTTTCACCGACCGGGCTTGGATAGTGCTAGCTTACCCCCACGTCTTTCCACCTAAGTGCATGAGTCTGCAGTGGAACGCCGGCCGCTAACCTCCGCACTCACACGCATACTCTACCGATAGATCAGAGGAGGCCTAAGTCTCTGCGGAAGTTCCAGGGGATGACCTTACTATGGTCGGGAGGTCACGTCGCCGTTCAGATCGAACACGCATCAGCAGCATACAAGTCTAGCAGCCGTGATGTCTGTGTCCCTGAACCTCCCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTCAACCTCCGCTCGGCTCGGGTACCTCGGTTTCATCCCGGACTATCCCGCGACGTAATCTCTACGCGTCCCCGCCAGACAGCTAGATATAGTTTTCTAAAGGTATAAAACAGTCTAGAATGTCGACAGAAATGGAGGTCGTTAGTGTTCTTAAGTACCTTGACAACAAATCCATATTGGTCGTTGGAGCTGCTGGGTTCTTAGCAAATATCTTTGTGGAGAAGATATTAAGGGTGGCACCAAACGTGAAGAAACTCTATCTCCTTCTAAGAGCATCAAAAGGAAAATCTGCTACCCAGAGGTTTAACGACGAGATTTTGAAGAAAGATTTGTTCAAGGATCGCTAAAGGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTATCGTGCTGAAGGAGAAGTATGGTCCCAATCTAAATCAACTTACATCAGAGAAAATCACTATTGTCGACGGAGACATTTGCCTTCTAAATGACTCTCATCTTAGAGAACGTATGCAAAAAGAAATAGATATTGTTGTCAATGTTGCAGCCACAACAAACTTTGACGAAAGATATGATGTTGGGCTTGGGATCAATACATTTGGAGCTCTCAACGTCCTTAACTTTGCCAAAAAATGTGTTAAAGTTCAATTGCTTCTCCATGTCTCAACTGCTTATGTTTGTGGAGAAAAGCCAGGTCTCATACCTGAAAAACCATTCATCATGGAAGAGATTCGTAACGAGAATGGTCTTCAATTGGATATTAACCTTGAAAGGGAGCTTATGAAATTGGTTCAGGAGAAACTTGACCAGCTCCGAGTAAACGGAGCCGCTCCTGAAACCATCACGGAAACCATGAAGGATCTCGGACTCAGACGGGCAAAGATGTACGGATGGCCAAACACATATGTGTTATCGGTGAGCCCTCTCAGAACAGCATCGCACCAAAGCAATGGGGGAGATGATGGTAGGGACAAAAAGAGAAAAATCGCGCGCCTCTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCAGCCCATCAATAGAGCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTCAACCTCATCGTCTGTCACTTGTGTTGCTTCGTCCTTCAATTATTACCAGCACATTCAAAGAACCATTTCCTGGTTGGACTGAGGGCATCAGGACTATTGATAGTTTAGCTGTTGGATATGGCAAAGGCAAACTCACGGTCGATGTTAACTCGGTCTGCGATATGATACCAGTGGATATGGTGGCAAACGCAATGATCACGGCTGCAGCCAAACACGCTGGAGGTTCAGGGGTTCACATGGTGTACCATGTCGGCTCATCTCACCAGAACCCAGTCACATTTGGAGAGATTCATGAGATTGCGGTTCGTTACTTTACGAAAAACCCTTTGCGAAGTCGCAATGGCTCACTCATAACCGTCTCAAAAGTGAGGTTCATACCAACCATGGCTTTGTTCAGCCTCTACATGACCCTACGTTACAAACTACCTCTCCAGTTATTAAAACTAGTTGACATAACATATCCTTGGAGAAACGGAGATAAATATGGAGACAAGAACCGCAAACTCGAGTTGGTGATGAGATTGGTAGAGCTTTATGATCGTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCAGCCCATATCGAGCCTTATGTACTCTTCAAGGGAATATTCGACGATAGAAATACAAAGAGTTTATGCGCAAACCAGAAGGAAGAGGAGATCAAAAATACAGAAAAATTGATGTTTGATTTCGACCCAAAAGGAATTAATTGGGGAGATTATCTCACTAAAATACACATTTCTGGACTCGTCACACACGTGCTTAAGAAGTGATGTTGAAATAAAGTTCCAGGGGATGACCTTACTATGGTCGGGAGGTCACGTCGCCGTTCAGAACACGCATCAGCAGCATACAAGTCTAGCAGCCGTGATGTCTGTGTCCCTGAACCTCCCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTCAACCTCCGCTCGGCTCGGGTACCTCGGTTTCATCCCGGACTATCCCGCGACGTAATCTCTACGCGTCCCCGCCAGACAGCTAGATTTTGTTTTCTTATAAAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCGCCTACGTAGCAATCCGATAGCCCATCAATAGAGCATGGGCCGGAACTTCGATGCTCTCCCAGATGAGGGGACCAGCAGTCCGATGATTCAAGAGGTTCCAGGGGATGACCTTACTATGGTCGGGAGGTCACGTCGCCGTTCAGAACACGCATCAGCAGCATACAAGTCTAGCAGCCGTGATGTCTGTGTCCCTGAACCTCCCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTATCGCAACCTCCGCTCGGCTCGGGTACCTCGGTTTCATCCCGGACTATCCCGCGACGTAATCTCTACGCGTCCCCGCCAGACAGCTAGATTTTGTTTTCTAAAGGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGCAACGCGTCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCGCCTACGTAGCAATCCGATAGCCCATCAATAGAGCATGGGCCGGAACTTCGATGCTCTCCCAGATGAGGGGACCAGCAGTCGATTCAAGAGCCGACGCTGGCGTGCAGgccCCCGCTATATCTCTAAGTTTGGTTATAAACGGCGGCCCGAATGTTTTGTCTATTTATGCCTCTCTTTGATGTTTTGGGCGATACACAAAACCCAAACTCATGGGAACTCCAAAAGAAGATTCGTTTGAGTGCAGGGATCGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCGCCTCTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCGCCTACGTAGCAATCCGATAGCCCATCATCGGAACGGAAGAGAGTGCCGGAGTTTGTGTTCTTAGCTCACGGAGTTGATGTAATGTCGGCGATGCATGCACCGTTCGTGTTCAGATCTTTTGCTTCAATGCCATCTACCACAAGGATATTCTTGCTACCGATGTGGCCATTCACGTTCTGTGTTATGTTGGGCATGTGGGCTTGGTCAAAGACTTTTCTTTTCAGCTTCTATTCCCTCAGGAACAATCTTTGTCAGACTTGGGGCGTTCCTAGATTCGGATTCCAATACTTCTTACCGATTGCTACAAAAGGAATTAATGATCAAATTGAGGCTGCGATTCTTAGAGCTGATAAGATTGGTGTTAAAGTTACAAGCTTGGCTGCTCTCAACAAGAACGAAGCTCTAAATGGTGGTGGAACACTGTTTGTCAACAAGCATCCTGACCTTAGAGTTCGTGTGGTTCATGGGAACACTTTAACTGCAGCAGTGATTCTCTATGAAATTCCAAAAGATGTGAATGAGGTTTTCTTGACTGGATAATGAAATAAAGCAGCATACAAGTCTAGCAGCCGTGATGTCTGTGTCCCTGAACCTCCCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTCAACCTCCGCTCGGCTCGGGTACCTCGGTTTCATCCCGGACTATCCCGCGACGTAATCTCTACGCGTCCCCGCCAGACAGCTAGATTTTGTTTTCTAAAGGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCGCCTCTTTTATAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCGCCTACGTAGCAATCCGATAGCCCATCAATAGAGCCAAAGCTTGACAACAGTAGAGGCCTTCAACCTCCGCTCGGCTCGGGTACCTCGGTTTCATCCCGGACTATCCCGCGACGTAATCTCTACGCGTCCCCGCTATAAAGCTAGATTTTGTTTTCTAAAGGAAAGTACAGGAGTCCATTATGACGTAGCAATCCGATAGCCCATCAATAGAGCATGGGCCGGAACTTCGATGCTCTCCCAGATGAGGGGACCAGCAGTCGATTCAAGAGCCGACGCTGGCGTGCAGCCCGCCGCGTCTCTAAGTTTGGTAAAGTACAGGAGTCCATTATGCGCGTCCATGGGCCGGAACTTCGATGCTCTCCCAGATGAGGGGACCAGCAGTCGATTCAAGAGTTTATTGTCTGTTCAGTTGGTCCCCATTTCTTGATGATGCAGACTATGGTACGTTGGAGTACGGGTGAGATATCGTAAGACTGGAAGAATCTCGAACAGCTTGTGAGAGAATATCTCAACGTTACAATGTCCTAAACACCTCATGAAATCAAACATAACAGCGTACGATACACGCTGGAGGTTCAGGGGTTCACATGGTGTACCATGTCGGCTCATCTCACCAGAACCCAGTCACATTTGGCGATACCGTAGATCGCACTTAATGATCCAACACCAAACAAGCAACATCCAATCAATGGAACACCAGCTACGACACAGAGGATAATGTTTTCCAATAACGTTGCGTTTCCAGCAGTCATGGGATGTGGAACAGGAGATGAGTGGTGGAAAGAGTGCATACTGGGCTACTTTTATAGCAGCATACAAGTCTATAAGCCGTGATGTCTGTGTCCCTGAACCTCCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGATCCCGCGACGTAATCTCTACGCGTCCCCGCCAGACAGCTAGATTTTGTTTTCTAAAGGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGTATATTGGGCAGAAGACTATAAACCAGTCTTCGCCATGGCCACTTCTAAGCTGGGAAGAGCTATTGCTCTTTACCTTTGTCGCCGTGGAGTGAGAGTTCTCATGTTGACATTGTCTATGGAAAGGTTCCAAAAGATTCAGAAAGAGGCTCCTGTTGAGTTCCAGAACAACCTTGTACAAGTGACCAAATACAATGCTGCTCAACACTGCAAGACTTGGAAGGTTGGAAAATGGTTAACACCAAGAGAGCAGAGCTGGATCGAACAGCTTTAATCGGCTCCTGCAGGGACGCATTTCCATCAGTTTGTGGTGCCACCAATCCTTAAGTTTAGAAGGAACTGCACTTACGGTGATCTAGCAGCTATGAAGCTCCCTAAAGATGTTGAAGGACTCGGAACTTGCGAGTACACGATGGAGAGAGGGGTGGTACATGCGTGCCATGCAGGAGGAGTGGTTCATAATATCGCTACGCGTCCCCGCCAGACAGCTAGATTTTGTTTTCTAAAGGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCGCCTCTTGGGCAGAAGACGTAACTATCGGCTATGGGGTTGGAAGCATCAATGGGTTGGAGCCATATGTGTATGCCGTGGCGATTTGGTGTGGGAAGCAGCCATGAAGTATGGTCTATGTGCTGTTTCTTCACTCACAAAATCTGAACACTAATAAAGCATCTCAGAGTAGTGACAAGGTTGACCAGCCAGCACTCTACGCAGAGGGCAATGATGTCGGAGCTCATGCCCGAGTCGCAATGGCAAACGTGCACCAACGGACCACAGACGGGAACAGCTTTACTTGTTGATTTCGAGCTCGATTAGAATAGGCCCCCTGTAGGTATGATTGTAGCGAGATGGGAGGTTCCGCGCCAGCTAAGAGATTGGTTTTCACCGACCGGGCTTGGATAGTGCTAGCTTACCCCCACGTCTTTCCACCTAAGTGCATGAGTCTGCAGTGGAACGCCGGCCGCTAACCTCCGCACTCACACGCATACTCTACCGATAATCGGATCAGAGGAGGCCTAAGTCTCTGCGGAAGTTCCAGGGGATGACCTTACTATGGTCGGGAGGTCACGTCGCCGTTCAGAACACGCATCAGCAGCATACAAGTCTAGCAGCCGTGATGTCTGTGTCCCTGAACCTCCCCAAAGCGGGAGTTGACAACAGTAGAGGCCTTCAACCTCCGCTCGGCTCGGGTACCTCGGTTTCATCCCGGACTATCCCGCGACGTAATCTCTACGCGTCCCCGCCAGACAGCTAGATTTTGTTTTCTAAAGGAAAGTACAGGAGTCCATTATGCGCGTCCTGTCTGAGCCGAGAGCAACTTGGGCAGAAGACGTAACTG

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Answer #1

Total ATGs--- 164

5'-ATG-3' start codon Open Reading Frames- 134

  • ATGGGGGAGATGATGGTAGGGACAAAAAGAGAAAAATCGCGCGCCTCTTGGGCAGAAGACGTAACTGGTGAGCCCTCTCAGAACAGCGCAGCCCATCAA
  • ATGATGCAGACTATGGTACGTTGGAGTACGGGTGAGATATCG

( underlines are start codon ATG, than the bold ATGs are present as a motif in reading frame)

you can copy these sequences and ctrl+F to find the it in the whole sequence given on the question.

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