In reaction of glyceraldehyde-3-phosphate dehydrogenase(G-3-P):- During the reaction of G-3-P undergo oxidation and phosphorlyation. The product, glycerate-1,3-bisphoshate, contain a high energy phosphoanhydride bond, which used in the next reaction to generate ATP,
Glycerate-1,3-bisphosphate is catalyzed by G-3-P dehydrogenase, a tetramer composed by four identical subunits. Each subunit contains one binding site for G-3-P and another for NAD, an oxidizing agent. As an enzyme form a covalent thoether bond with substrate, a hydride ion id transferred to NAD+, then leave the active site. NADH, the reduced form of NAD+, then leave the active site and is replaced by an incoming NAD+.
Synthesis of ATP : In This reaction ATP synthesized as phosphoglycerate kinase catalyst the transfer of the high energy phosphoryl group of glycerate-1,3-bisphosphate to ADP .
A substrate level phosphorylation. because the synthesis of ATP
is endoergonic, it required an energy source. ATP is produced by
transfer of a phosphoryl group from a substrate with high
phosphoryl transfer potential( glycerate-1,3-bisphosphate)to
produced a compound with lower transfer potential(ATP) .
Identify the type of high energy bond in the intermediate of the glyceraldehyde-3-phosphate dehydrogenase reaction. What...
Question 3 (4 points) The enzyme glyceraldehyde 3-phosphate dehydrogenase catalyzes the reaction glyceraldehyde 3- phosphate → 1,3 diphosphoglycerate. The region of the enzyme where glyceraldehyde 3-phosphate binds is called the transition state. O groove. catalyst. active site.
Glyceraldehyde-3-phosphate dehydrogenase catalyzes the phosphorylation of glyceraldehyde-3-phosphate, but unlike other glycolytic reactions, it does not require energy investment from ATP. This reaction occurs in two stages: oxidation/reduction and phosphorylation. Why is the oxidation/reduction reaction necessary to make phosphorylation favorable? Choose one: A. The oxidation/reduction reaction is necessary to oxidize phosphate, allowing addition to the substrate. B. The oxidation/reduction reaction is necessary to form an intermediate with a large free energy of hydrolysis. C. The oxidation/reduction reaction is necessary to produce...
In the formation of the thioester in the oxidation of Glyceraldehyde-3-phosphate by Glyceraldehyde-3-dehydrogenase which of the following statements is true? A) The thioester intermediate is more stable (lower free energy) than the reactant B) the thioester intermediate is less stable (higher free energy) than the reactant C) the thioester intermediate is more stable (lower free energy) than the product D) In the organic chemistry lab, thioester allows for the formation of acyl-phosphate E) in the organic chemistry lab, thoiester formation...
35) The overall reaction of glyceraldehyde 3-phosphate dehydrogenase (GAP glyceraldehyde 3-phosphate + NAD+ + P = 1,3-bisphosphoglycerate + NADH GAPDH couples together two reactions with favorable (AG'°-50 kj/mol) and unfavorable (AG' +50 kJ/mol) Gibbs free energies, respectively. a) (6 pts) Write the balanced chemical equations for the two separate reactions. b) (6 pts) Draw the structure of the thiohemiacetal intermediate and show the mechanism for generating the acyl thioester intermediate. 36) (4 pts) Under anaerobic conditions, lactic acid fermentation regenerates...
The conversion of glyceraldehyde 3-phosphate to 1,3-bisphosphoglycerate is catalyzed by the enzyme glyceraldehyde 3-phosphate dehydrogenase. Formation of the enzyme-substrate complex involves nucleophilic attack by an active site cysteine residue on glyceraldehyde 3-phosphate to form a tetrahedral intermediate. However, cysteine-dependent nucleophilic attack only occurs when NAD+ is bound, which depresses the pKR for cysteine from 8 to 5.5. Please propose an alternative active site arrangement that may lead to the formation of a tetrahedral covalent intermediate without the requirement for NAD+...
The mechanism of glyceraldehyde 3 phosphate dehydrogenase. In
step 1 (Top Left) the sulfur from the cysteine loses its hydrogen
to the carbonyl carbon of the substrate. I think is wrong and the
hydrogen is stolen by the histidine (nitrogen) using a base
catalyst reaction.
lser Glyceraldehyde 3-phosphate NAD CONH2 H -N + HH Hemithioacetal Oxidation NAD NADH CONH CONH2 Но RN + H -N / H Η Η Hн s NADH NAD Thioester intermediate Thioester intermediate Phosphorylation CONH2 O...
1) [25 pts] The time it takes glyceraldehyde-3-phosphate dehydrogenase to convert aldehyde to carbolic acid follows a normal distribution with a mean of 19 milliseconds and standard deviation of 4.04 milliseconds. a) What is the probability that it will take glyceraldehyde-3-phosphate dehydrogenase between 15 milliseconds and 20 milliseconds to convert aldehyde to carbolic acid? b) What is the probability that it will take glyceraldehyde-3-phosphate dehydrogenase more than 20 milliseconds to convert aldehyde to carbolic acid? c) What is the probability...
Pyruvate dehydrogenase and glyceraldehyde 3 phosphate dehydrogenase use NAD as an electron acceptor, why don't the two enzymes compete for the same pool of cellular NAD?
1) [25 pts] The time it takes glyceraldehyde-3-phosphate dehydrogenase to convert aldehyde to carbolic acid follows a normal distribution with a mean of 19 milliseconds and standard deviation of 4.04 milliseconds. a) What is the probability that it will take glyceraldehyde-3-phosphate dehydrogenase between 15 milliseconds and 20 milliseconds to convert aldehyde to carbolic acid? b) What is the probability that it will take glyceraldehyde-3-phosphate dehydrogenase more than 20 milliseconds to convert aldehyde to carbolic acid? c) What is the probability...
1) [25 pts] The time it takes glyceraldehyde-3-phosphate dehydrogenase to convert aldehyde to carbolic acid follows a normal distribution with a mean of 19 milliseconds and standard deviation of 4.04 milliseconds. a) What is the probability that it will take glyceraldehyde-3-phosphate dehydrogenase between 15 milliseconds and 20 milliseconds to convert aldehyde to carbolic acid? b) What is the probability that it will take glyceraldehyde-3-phosphate dehydrogenase more than 20 milliseconds to convert aldehyde to carbolic acid? c) What is the probability...